G. Verniest

A theoretical study on the solvated structural properties of various metalated 3-halo-1-azaallylic anions

B. De Sterck, V. Van Speybroeck, S. Mangelinckx, G. Verniest, N. De Kimpe, M. Waroquier
Journal of Physical Chemistry A
113 (22), 6375-6380
2009
A1

Abstract 

Metalated 3-halo-1-azaallylic anions are important building blocks for the preparation of a wide variety of heterocyclic and highly functionalized compounds. A theoretical description of the structural properties of halogenated 1-azaallylic anions in vacuo and in tetrahydrofuran (THF) solution is presented to gain insight into their reactivity behavior. The configurational flexibility of fluorinated and chlorinated 1-azaallylic anions is examined, and it is shown that these anions have far less configurational flexibility as compared with nonhalogenated analogues, with a strong preference to occur as Z/anti isomers. In addition, the driving force for transmetalation, that is, the replacement of the lithium cations with K+, Cu+, ZnCl+, CuCl+, or MgBr+ is studied. To obtain reliable results, the structures were modeled in THF using the combined implicit/explicit solvent approach resulting in different coordination numbers for lithium in the Z/anti and E/anti isomers. Calculations on dimerization energies show that coordination with THF is energetically preferred over aggregation.

Four-Membered Heterocycles with a Carbon−Heteroatom Exocyclic Double Bond at the 3-Position:  Puckering Potential and Thermodynamic Properties

P. Vansteenkiste, V. Van Speybroeck, G. Verniest, N. De Kimpe, M. Waroquier
Journal of Physical Chemistry A
111 (14), 2797-2803
2007
A1

Abstract 

Despite the specific importance of four-membered heterocycles with a carbon−heteroatom double bond at the 3-position in organic and medicinal chemistry, little attention has been given up to now to theoretical computational studies on these molecules. However, the overall geometry, and degree of ring puckering especially, could significantly influence the reactivity and biological properties of these four-membered ring compounds. In this paper, focus is made on the influence of different substituents on the equilibrium geometry, ring puckering potential, and thermodynamic quantities. It was found that these properties are mainly affected by the heteroatom (oxygen, nitrogen, sulfur, phosphorus) contained in the ring skeleton. Moreover, the correct description of the puckering potential with the hindered rotor treatment leads to substantial corrections on the thermodynamic properties in the harmonic oscillator approximation.

Applicability of the Hindered Rotor Scheme to the Puckering Mode in Four-Membered Rings

P. Vansteenkiste, V. Van Speybroeck, G. Verniest, N. De Kimpe, M. Waroquier
Journal of Physical Chemistry A
110 (10), 3838-3844
2006
A1

Abstract 

The hindered rotor scheme, originally developed for internal rotors in flexible chains (Van Speybroeck, V.; Van Neck, D.; Waroquier, M.; Wauters, S.; Saeys, M.; Marin, G. B. J. Phys. Chem. A 2000, 104, 10939), is extended to puckering motions in four-membered rings. The applicability of the approach is tested in a variety of heterocyclic compounds for which the partition function, entropy, and heat capacity are calculated. The entropy may be substantially altered by a correct description of the puckering mode. The equilibrium puckering angle ranges between 0° and 30° depending on the heterosubstitution X (CH2, O, S, NH, PH, CO, CS, CNH, CPH) in the four-membered ring.

Insight into the solvation and isomerization of 3-halo-1-azaallylic anions from ab initio metadynamics calculations and NMR experiments

R. Declerck, B. De Sterck, T. Verstraelen, G. Verniest, S. Mangelinckx, J. Jacobs, N. De Kimpe, M. Waroquier, V. Van Speybroeck
Chemistry - A European Journal
15 (3), 580 - 584
2009
A1

Abstract 

Long live theZisomer! The solvation and isomerization properties of lithiated 3-chloro-1-azaallylic anions in tetrahydrofuran are revealed. Extensive and convincing evidence is obtained from state-of-the-art first-principle molecular dynamics and metadynamics simulations in an explicit periodic solvent model, together with detailed NMR experiments.

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