G.B. Marin

Theoretical Study of the Thermodynamics and Kinetics of Hydrogen Abstractions from Hydrocarbons

A.G. Vandeputte, M. Sabbe, M-F. Reyniers, V. Van Speybroeck, M. Waroquier, G.B. Marin
Journal of Physical Chemistry A
111 (46), 11771–11786
2007
A1

Abstract 

Thermochemical and kinetic data were calculated at four cost-effective levels of theory for a set consisting of five hydrogen abstraction reactions between hydrocarbons for which experimental data are available. The selection of a reliable, yet cost-effective method to study this type of reactions for a broad range of applications was done on the basis of comparison with experimental data or with results obtained from computationally demanding high level of theory calculations. For this benchmark study two composite methods (CBS-QB3 and G3B3) and two density functional theory (DFT) methods, MPW1PW91/6-311G(2d,d,p) and BMK/6-311G(2d,d,p), were selected. All four methods succeeded well in describing the thermochemical properties of the five studied hydrogen abstraction reactions. High-level Weizmann-1 (W1) calculations indicated that CBS-QB3 succeeds in predicting the most accurate reaction barrier for the hydrogen abstraction of methane by methyl but tends to underestimate the reaction barriers for reactions where spin contamination is observed in the transition state. Experimental rate coefficients were most accurately predicted with CBS-QB3. Therefore, CBS-QB3 was selected to investigate the influence of both the 1D hindered internal rotor treatment about the forming bond (1D-HR) and tunneling on the rate coefficients for a set of 21 hydrogen abstraction reactions. Three zero curvature tunneling (ZCT) methods were evaluated (Wigner, Skodje & Truhlar, Eckart). As the computationally more demanding centrifugal dominant small curvature semiclassical (CD-SCS) tunneling method did not yield significantly better agreement with experiment compared to the ZCT methods, CD-SCS tunneling contributions were only assessed for the hydrogen abstractions by methyl from methane and ethane. The best agreement with experimental rate coefficients was found when Eckart tunneling and 1D-HR corrections were applied. A mean deviation of a factor 6 on the rate coefficients is found for the complete set of 21 reactions at temperatures ranging from 298 to 1000 K. Tunneling corrections play a critical role in obtaining accurate rate coefficients, especially at lower temperatures, whereas the hindered rotor treatment only improves the agreement with experiment in the high-temperature range.

Refinement of the supramolecular concept in methanol-to-olefin catalysis

D. Lesthaeghe, V. Van Speybroeck, G.B. Marin, M. Waroquier
Studies in Surface Science and Catalysis
170, 1668-1676
2007
P1

Abstract 

The supramolecular character of methanol-to-olefin conversion in acidic zeolites is thoroughly investigated from a theoretical viewpoint. State-of-the-art modeling techniques have not only led to an absolute rejection of the intensively studied direct mechanisms, but have also provided additional insights into the alternative hydrocarbon pool proposal. The role of various external factors such as zeolite topology on the formation of crucial carbenium ions is discussed and the establaished supramolecular picture is refined.

Modeling elementary reactions in coke formation from first principles

V. Van Speybroeck, K. Hemelsoet, B. Minner, G.B. Marin, M. Waroquier
Molecular Simulation
33 (9), 879-887
2007
A1

Abstract 

Theoretical calculations are presented on elementary reactions which are important during coke formation in a thermal cracking unit. This process is known to proceed through a free radical chain mechanism. The elementary reaction steps that lead to the growth of the coke surface can be divided into five classes of reversible reactions: hydrogen abstraction, substitution, gas phase olefin addition to radical surface species, gas phase radical addition to olefinic bonds and cyclization. To identify the elementary reaction classes that determine the coking rate, all microscopic routes that start from benzene and lead to naphthalene have been investigated. It is found that initial creation of surface radicals, either by hydrogen abstraction or substitution and subsequent hydrogen abstractions, determines the global coking rate. The influence of the local polyaromatic structure on the kinetics of the hydrogen abstraction reactions is determined by performing calculations on a large set of polyaromatic hydrocarbons (PAHs). On basis of the BDE values six types of possible reactive sites at the coke surface can be distinguished. For the initial hydrogen abstraction the local polyaromatic structure strongly influences the reaction kinetics and abstraction is preferred from less congested sites of the polyaromatic.

arbon-Centered Radical Addition and β-Scission Reactions: Modeling of Activation Energies and Pre-exponential Factors

M. Sabbe, A.G. Vandeputte, M-F. Reyniers, V. Van Speybroeck, M. Waroquier, G.B. Marin
Journal of Physical Chemistry A
9 (1), 124-140
2007
A1

Abstract 

A consistent set of group additive values ΔGAV° for 46 groups is derived, allowing the calculation of rate coefficients for hydrocarbon radical additions and β-scission reactions. A database of 51 rate coefficients based on CBS-QB3 calculations with corrections for hindered internal rotation was used as training set. The results of this computational method agree well with experimentally observed rate coefficients with a mean factor of deviation of 3, as benchmarked on a set of nine reactions. The temperature dependence on the resulting ΔGAV°s in the broad range of 300–1300 K is limited to ±4.5 kJ mol−1 on activation energies and to ±0.4 on logA (A: pre-exponential factor) for 90 % of the groups. Validation of the ΔGAV°s was performed for a test set of 13 reactions. In the absence of severe steric hindrance and resonance effects in the transition state, the rate coefficients predicted by group additivity are within a factor of 3 of the CBS-QB3 ab initio rate coefficients for more than 90 % of the reactions in the test set. It can thus be expected that in most cases the GA method performs even better than standard DFT calculations for which a deviation factor of 10 is generally considered to be acceptable.

Zeolite Shape-Selectivity in the gem-Methylation of Aromatic Hydrocarbons

D. Lesthaeghe, B. De Sterck, V. Van Speybroeck, G.B. Marin, M. Waroquier
Angewandte Chemie int. Ed.
46 (8), 1311-1314
2007
A1

Abstract 

The kind of olefins obtained from methanol in zeolites is strongly dependent on specific combinations of the intermediate organic hydrocarbon-pool species and zeolite topology (see picture). If the cage is too large, neutral species are favored over reactive cations. If the cage is too small, transition-state-shape selectivity poses severe limitations on the reactivity of bulkier species.

Ab initio thermochemistry and Kinetics of Hydrogen Abstraction by Methyl Radical from Polycyclic Aromatic Hydrocarbons

K. Hemelsoet, V. Van Speybroeck, D. Moran, G.B. Marin, L. Radom, M. Waroquier
Journal of Physical Chemistry A
110 (50), 13624-13631
2006
A1

Abstract 

Thermodynamic and kinetic properties relating to hydrogen abstraction by methyl radical from various sites in polycyclic aromatic hydrocarbons (PAHs) have been investigated. The reaction enthalpies (298 K), barriers (0 K), and activation energies and pre-exponential factors (700−1100 K), have been calculated by means of density functional theory, specifically with B3-LYP/6-311G(d,p) geometries, followed by BMK/6-311+G(3df,2p) single-point energy calculations. For uncongested sites in the PAHs, a reasonable correlation is obtained between reactivities (as characterized by the reaction barriers) and reaction enthalpies. This is reflected in a Bell−Evans−Polanyi (BEP) relationship. However, for congested sites, abstraction is accompanied both by lower reaction enthalpies (due to relief of steric strain) and also by reduced reactivities (due to significantly increased steric hindrance effects in the transition structures), so that the BEP relationship does not hold. In addition, the reaction enthalpies and kinetic parameters for the series of linear acenes indicate that abstraction is more difficult from the central rings.

Theoretical study on the alteration of fundamental zeolite properties by methylene functionalization

D. Lesthaeghe, G. Delcour, V. Van Speybroeck, G.B. Marin, M. Waroquier
Microporous and Mesoporous Materials
96 (1-3), 350-356
2006
A1

Abstract 

Following the recent boost of papers reporting synthesis of organic functionalized microporous and mesoporous materials, a detailed theoretical study was performed to probe the effect of organic functionalizations on certain fundamental properties in organosilicas from a microscopic viewpoint. The simplest functionalization of a bridging methylene unit was modeled in a zeolite MFI-type framework to serve as a model system for more complex organic moieties and other structures. Calculated adsorption energies for H2O and NH3 in methylenesilica reveal that the methylene functionalization increases the strength of the interaction of both probe molecules with the zeolite framework. Investigation of the combination of an ion-exchanged aluminum site containing a CH2-bridge demonstrates how the methylene moiety creates a steric obstruction for adsorbed alkali metal ions such as Li, Na and K, resulting in a weaker bond between these ions and the aluminum site. Finally, a study of proton mobility from a Brønsted acid site to a neighboring methylene bridge reveals that the acid proton will most likely migrate from the basic oxygen bridge to the methylene substitution. This implies that the combination of methylene moieties with aluminum impurities will lead to terminally bound methyl groups and cleavage of the hybrid organic–inorganic lattice.

Hydrocarbon Bond Dissociation Enthalpies: From Substituted Aromatics to Large Polyaromatics

V. Van Speybroeck, G.B. Marin, M. Waroquier
ChemPhysChem
7 (10), 2205-2214
2006
A1

Abstract 

Hydrocarbon-bond dissociation enthalpies (BDE) at 298 K are calculated for a set of hydrocarbons. An efficient method for calculating the BDE values is derived on the basis of a comparative study with experimental data. The methods considered are based on density functional theory (DFT) including the B3LYP, MPW1PW91, B3P86, B3PW91, MPW1P86, KMLYP, MPW1K and BMK functionals. The commonly known sequence for radical stability is quantified on the basis of BDE values. The recommended procedure is extrapolated to substituted aromatics and large polyaromatic hydrocarbons (PAHs) to obtain insight into the factors that govern the stability of the radicals. Furthermore it is shown that BDEs are also good reactivity descriptors for subsequent additions involving the formed radicals. Linear correlations, similar to classical Evans–Polanyi–Semenov plots, between the BDE and the reaction barriers for addition reactions with ethene, ethyne, propene, propyne and butadiene are found, as the exothermicity is primarily determined by the stability of the originating reactant radical.

Understanding the failure of direct C-C coupling in the zeolite-catalyzed methanol-to-olefin process

D. Lesthaeghe, V. Van Speybroeck, G.B. Marin, M. Waroquier
Angewandte Chemie int. Ed.
45 (11), 1714-1719
2006
A1

Abstract 

You are the weakest link, goodbye! Many individual steps of the direct mechanisms in the methanol-to-olefin process are tied together in an integrated scheme, allowing a simple identification of the weakest links. Calculations show that a combined pathway from methanol directly to ethylene does not exist and no CC bond can be formed directly.

Ab Initio Group Contribution Method for Activation Energies of Hydrogen Abstraction Reactions

M. Saeys, M-F. Reyniers, V. Van Speybroeck, M. Waroquier, G.B. Marin
ChemPhysChem
7 (1), 188-199
2006
A1

Abstract 

The group contribution method for activation energies is applied to hydrogen abstraction reactions. To this end an ab initio database was constructed, which consisted of activation energies calculated with the ab initio CBS-QB3 method for a limited set of well-chosen homologous reactions. CBS-QB3 is shown to predict reaction rate coefficients within a factor of 2–4 and Arrhenius activation energies within 3–5 kJ mol−1of experimental data. Activation energies in the set of homologous reactions vary over 156 kJ mol−1with the structure of the abstracting radical and over 94 kJ mol−1with the structure of the abstracted hydrocarbon. The parameters required for the group contribution method, the so-called standard activation group additivity values, were determined from this database. To test the accuracy of the group contribution method, a large set of 88 additional activation energies were calculated from first principles and compared with the predictions from the group contribution method. It was found that the group contribution method yields accurate activation energies for hydrogen-transfer reactions between hydrogen molecules, alkylic hydrocarbons, and vinylic hydrocarbons, with the largest deviations being less than 6 kJ mol−1. For reactions between allylic and propargylic hydrocarbons, the transition state is believed to be stabilized by resonance effects, thus requiring the introduction of an appropriate correction term to obtain a reliable prediction of the activation energy for this subclass of hydrogen abstraction reactions.

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